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Table 2 Intersections and simulations between DEGs and DMGs

From: Genome-wide analysis of DNA methylation in hypothalamus and ovary of Capra hircus

DEGs thresholds

n° of DEGs

n° of DMGs (FDR < 0.05)

DEGs ∩ DMGs

100 K simulationsa of ∩

± SD

P-value

FDR < 0.01

5512

1646

620

496.41

17.67

9.55E-12

FDR < 0.0001

2722

1646

349

245.22

13.78

1.92E-13

FDR < 0.000001

1424

1646

215

128.24

10.41

3.20E-16

  1. a100 k simulations refer to the jackknifing test used for the random crossing of DEGs and DMGs
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BMC Genomics

ISSN: 1471-2164

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