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Table 2 Number of breed specific tagging SNPs

From: Developing a 670k genotyping array to tag ~2M SNPs across 24 horse breeds

Breed Group Number Of Tag SNPs
Thoroughbred 144,175
Lusitano 148,097
Icelandic 148,206
F. Montagne 199,244
Arabian 199,264
Belgian 217,882
Marremanno 223,568
Standardbred 245,149
Trotter 256,790
Warmblood 304,510
Morgan 335,677
Land Race 338,040
QuarterHorse 366,702
Draft 370,701
Pony 387,279
  1. Number of tagging SNPs required to reconstruct haplotypes in each breed (MAF > 0.10 and 0.90 r2, See Methods)