Table 1 Summary of the sequence assembly after Illumina sequencing
Name | Raw reads | clean reads | Clean bases (Gb) | Error (%) | Q20 (%) | Q30 (%) | GC (%) |
|---|---|---|---|---|---|---|---|
HS6_1 | 49,903,755 | 38,402,310 | 4.77 | 0.03 | 96.57 | 92.85 | 44.76 |
HS6_2 | 49,903,755 | 38,402,310 | 4.65 | 0.03 | 95.98 | 92.20 | 44.95 |
HS9_1 | 46,539,168 | 35,817,632 | 4.45 | 0.05 | 93.95 | 88.36 | 44.18 |
HS9_2 | 46,539,168 | 35,817,632 | 4.35 | 0.04 | 95.01 | 90.34 | 44.01 |
HS12_1 | 51,223,821 | 44,394,563 | 5.52 | 0.04 | 94.93 | 89.93 | 45.28 |
HS12_2 | 51,223,821 | 44,394,563 | 5.3 | 0.04 | 94.76 | 89.94 | 45.89 |
HS20_1 | 41,509,566 | 32,019,489 | 3.98 | 0.03 | 96.62 | 92.95 | 46.08 |
HS20_2 | 41,509,566 | 32,019,489 | 3.97 | 0.03 | 96.14 | 92.47 | 46.11 |
Total | 378,352,620 | 301,267,988 | 36.97 | - | - | Â | Â |