Table 2 De novo assembly summary statistics
From: Transcriptome profiling of tobacco (Nicotiana tabacum) pollen and pollen tubes
| Â | MIRAÂ +Â CAP3 |
|---|---|
Number of reads assembled into contigs | 1,278,508 |
Number of contigs | 42,316 |
Average length of contigs (nt) | 886 |
Range of contig lengths (nt) | 40–7008 |
Average coverage of contigs (reads/base) | 13.35 |
Number of singletons | 139,059 |
Average length of singletons (nt) | 127 |
Range of singleton lengths (nt) | 1–1004 |
Number of large contigs (> 80Â nt) | 41,427 |
Number of large singletons (>80Â nt) | 34,937 |
Total number of unigenes | 76,364 |
Average coverage of unigenes (reads/base) | 7.83 |
Average length of unigenes (nt) | 683 |