Table 2 Percent off-target alignments for the align all and best align strategies
From: High resolution measurement of DUF1220 domain copy number from whole genome sequence data
| Â | Clade | Domain | Gene | Group | Clade |
|---|---|---|---|---|---|
Align All/mrsFast | CON1 | 88.1% | 85.6% | 75.0% | 0% |
CON2 | 89.1 | 89.1 | 83.7 | 0 | |
CON3 | 94.7 | 94.7 | 91.7 | 49.9 | |
HLS1 | 98.8 | 88.5 | 45.7 | 46.8 | |
HLS2 | 98.8 | 87.7 | 42.8 | 38.9 | |
HLS3 | 98.7 | 85.4 | 48.1 | 25.1 | |
Best Align | CON1 | 20.3 | 17.4 | 5.1 | 0 |
CON2 | 24.8 | 24.8 | 16.0 | 0 | |
CON3 | 26.3 | 26.3 | 15.5 | 6.4 | |
HLS1 | 63.9 | 23.3 | 2.7 | 2.1 | |
HLS2 | 64.8 | 22.4 | 4.7 | 2.4 | |
HLS3 | 63.3 | 24.8 | 7.5 | 0.5 |