Locusa | Chromosome: [Mbp] (4.03) | Annotation (locus acronym) | Differential SNPs (No. of SNPs in RADseq) | Differential for traits (No. of SNPs) | Function category |
---|---|---|---|---|---|
DMG401006826 | I: 64.5 | Aldehyde oxidase (AOX) | RADseq (3 SNPs *)b | TY (3), TSY (3) | Hormone synthesis, reactive oxygen species [65] |
DMG400018273 | I: 79.2 | NADPH:adrenodoxin oxidoreductase, mitochondrial (ADXR) | RADseq (8 SNPs) | TSC (1), TY (7), TSY (5) | Steroid metabolism (uniprot/P22570)c |
DMG400010234 | II: 32.0 | Cysteine protease Cp5 (CP5) | RADseq (13 SNPs) | TSC (13), TY (8) | Protein degradation [66] |
DMG400030664 | II: 42.1 | Sporulation protein RMD5 (SpRMD5) | RADseq (25 SNPs) | TSC (8), TY (19), TSY (14) | Regulation of gluconeogenesis (uniprot/Q12508) |
DMG400030565 | V: 3.7 | Fructose-bisphosphate aldolase (FBA) | solcap_snp_c2_11924 | TSC | Glycolysis, gluconeogenesis, Calvin cycle [67] |
DMG400007286 | VI: 0.2 | Chloroplast protein 12 (CP12.1) | solcap_snp_c2_54011 | TY, TSY, TSC | Calvin cycle [68] |
DMG400020173 | VI: 58.2 | Mak, serine/threonine protein kinase (MAK) | RADseq (9 SNPs *) | TSC (4), TY (9), TSY (6) | Posttranslational regulation https://www.ncbi.nlm.nih.gov/gene/4117 |
DMG400020103 | VI: 58.2 | Glycosyltransferase QUASIMODO1 (QUA1) | solcap_snp_c2_9201, 9202, 9203 | TY (3), TSY (2) | Pectin synthesis, cell wall [69] |
DMG400017649 | IX: 44.1 | Pentatricopeptide repeat-containing protein (PPR) | RADseq (13 SNPs *) | TSC (11), TY (11) | |
DMG400029622 | IX: 58.4 | 60S acidic ribosomal protein P0 (RP60S) | solcap_snp_c2_3063 | TY, TSY | |
DMG400007797 | XII: 1.3 | Citrate synthase (CIS) | RADseq (3 SNPs *), solcap_snp_c2_25372 | TSC (2), TY (2) | Tricarboxylic acid cycle, carbohydrate metabolism (uniprot/Q43175) |