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Fig. 3 | BMC Genomics

Fig. 3

From: A comparison of Illumina and Ion Torrent sequencing platforms in the context of differential gene expression

Fig. 3

Differential expression comparison agrees across platforms. Within each combination of platform and aligner, differentially-expressed genes (DEGs) were identified using a two-sided Mann-Whitney test, followed by a Benjamini-Hochberg (BH) correction for multiple testing. Genes with BH q-values <0.05 were identified as differentially expressed. a The overlap in DEGs between Illumina and Ion Torrent for each aligner. b MA plots for every combination of platform and aligner. Within each aligner, genes are colored according to the platform in which they were identified as DEGs

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BMC Genomics

ISSN: 1471-2164

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