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Table 3 KEGG pathway analysis for the target genes of differentially expressed miRNAs

From: Genome-wide identification of leaf abscission associated microRNAs in sugarcane (Saccharum officinarum L.)

Group

Pathway

ID

Target_gene

p-valuea

q-valueb

miRNA

Digestive system

Mineral absorption

ko04978

8

3.32E-08

5.08E-06

miRN141-3p, miRN167-3p

Glycan biosynthesis and metabolism

Glycosylphosphatidylinositol(GPI)-anchor biosynthesis

ko00563

9

7.80E-06

0.0012

miR393-3p, miR393-5p

Cell growth and death

Meiosis - yeast

ko04113

9

2.10E-05

0.0032

miRN245-5p, miR5384-3p

Signal transduction

Plant hormone signal transduction

ko04075

22

0.00022

0.03335

miR171c-3p, miR393-5p, miR5384-3p, miR167a-3p, miRN141-3p

Cell growth and death

Oocyte meiosis

ko04114

9

0.0003

0.04587

miR5384-3p, miRN245-5p

  1. ap-value calculated by student’s t-test, < 0.05
  2. bq-value calculated by an R package called “qvalue”, < 0.05