Physiological and de novo transcriptome analysis of the fermentation mechanism of Cerasus sachalinensis roots in response to short-term waterlogging

Table 1 Summary of sequences analysis in Cerasus sachalinensis roots

Sample	Raw Reads	Clean reads	Clean bases	Error(%)	Q20(%)	Q30(%)	GC(%)
CK_0h_1	46,798,272	44,621,416	6.69G	0.02	95.18	89.01	46.95
CK_0h_2	45,107,014	43,159,672	6.47G	0.02	95.31	89.26	46.96
CK_0h_3	45,874,828	44,106,108	6.62G	0.02	95.5	89.54	46.63
WL_3h_1	54,417,084	52,087,158	7.81G	0.02	95.14	88.93	45.63
WL_3h_2	45,655,674	43,708,280	6.56G	0.02	95.1	88.87	45.74
WL_3h_3	53,722,372	51,549,180	7.73G	0.02	95.34	89.27	46.09
WL_6h_1	53,385,772	50,952,524	7.64G	0.02	95.05	88.81	46.39
WL_6h_2	57,430,360	54,787,486	8.22G	0.02	94.91	88.53	45.75
WL_6h_3	53,239,000	51,043,882	7.66G	0.02	95.34	89.3	46.96
WL_24h_1	49,054,868	46,282,834	6.94G	0.02	95.52	89.59	46.34
WL_24h_2	57,973,622	54,699,464	8.2G	0.03	94.52	87.62	47
WL_24h_3	54,545,036	51,479,552	7.72G	0.02	95.32	89.23	46.3
Sumary	617,203,902	588,477,556	88.26G

ISSN: 1471-2164