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Table 1 Statistics of genome sequencing and assembly of Phomopsis longicolla isolate MSPL 10–6

From: Analysis of the genome sequence of Phomopsis longicolla: a fungal pathogen causing Phomopsis seed decay in soybean

Sequencing Statistics Library

Paired End (0.5 Kb inserts)

Mate Pair (3.9 Kb inserts)

Total

Raw data

 Size

6.9 Gb

16.2 Gb

23.1 Gb

 Coverage

108 X

253 X

361 X

Processed data

   

 Size

6.2 Gb

8.2 Gb

14.4 Gb

 Coverage

97 X

128 X

225 X

Assembly Statistics

 

Contigs

Scaffolds

 Total assembly size

 

 62 Mb

 66.7 Mb

 Total assembled sequences

 

 12,329

 108

 Longest sequence length

 

 215 Kb

 6.2 Mb

 Average sequence length

 

 5054 bp

 618 Kb

 N90 index

 

 2900

 62

 N90 length

 

 3.21 Kb

 299 Kb

 N50 index

 

 662

 17

 N50 length

 

 26.3 Kb

1.04 Mb