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Fig. 2 | BMC Genomics

Fig. 2

From: Gapless genome assembly of Colletotrichum higginsianum reveals chromosome structure and association of transposable elements with secondary metabolite gene clusters

Fig. 2

Schematic representation of selected C. higginsianum secondary metabolism (SM) genes clusters. a Resolution of a former split SM cluster by the PacBio assembly. The new cluster 16 encompasses four contigs from the old assembly [13], two of which contain former clusters 18 and TRC3. Arrowheads: transposable elements b Comparison of cluster 19 and the depudecin cluster of Alternaria brassicicola. Protein identity is high (> 70%) and gene order and orientation are conserved except for the gene DEP6/CH63R_06317. c Comparison of cluster 46 and the fusicoccin cluster from Diaporthe amygdali [74]. In D. amygdali, genes are dispersed at two distinct loci in contrast to C. higginsianum. Protein identity is moderate to high and genes were extensively rearranged. Shading indicates syntenic blocks and genes pairs. Yellow: acetyl-transferase

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BMC Genomics

ISSN: 1471-2164

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