Table 1 No. of different miRNA gene families derived from transposons, miRNA genes and paralogues in the 10 Oryza species
| Â | No. of TE-derived miRNA gene families | Total no. of gene families | Total no. of genes | Total number of hits | Av. no. of genes/gene family | Av. no. of paralogous duplicates/gene |
|---|---|---|---|---|---|---|
O. barthi | 58 | 157 | 375 | 643 | 2.38 | 1.71 |
O. brachyantha | 7 | 28 | 94 | 161 | 3.35 | 1.71 |
O. glaberima | 52 | 143 | 339 | 682 | 2.37 | 2.01 |
O. glumaepatula | 58 | 168 | 375 | 666 | 2.23 | 1.77 |
O. longistaminata | 38 | 132 | 407 | 605 | 3.08 | 1.48 |
O. meridionalis | 44 | 120 | 303 | 491 | 2.52 | 1.62 |
O. nivara | 64 | 176 | 388 | 676 | 2.20 | 1.74 |
O. punctata | 20 | 68 | 201 | 311 | 2.95 | 1.54 |
O. rufipogon | 64 | 184 | 385 | 694 | 2.09 | 1.80 |
O. sativa (indica) | 56 | 173 | 394 | 784 | 2.27 | 1.98 |