Table 2 Retention or loss of P450 orthologous gene pairs between A. thaliana and Brassica species from different polyploidy events
Polyploidy events | Brassica rapa | Brassica oleracea | Gene | Gene name | Family | Orthologous genes | Gene name | Brassica rapa | Brassica oleracea | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BraLF | BraMF1 | BraMF2 | BolLF | BolMF1 | BolMF2 | BraLF | BraMF1 | BraMF2 | BolLF | BolMF1 | BolMF2 | ||||||
α | Bra033251 | Bra032642 | NA | Bol040682 | Bol018470 | NA | AT1G01600.1 | CYP86A4 | CYP86 | AT4G00360.1 | CYP86A2 | Bra037336 | NA | Bra008519 | Bol011517 | NA | Bol040623 |
Bra015394 | NA | NA | Bol040956 | NA | NA | AT1G05160.1 | CYP88A3 | CYP88 | AT2G32440.1 | CYP88A4 | Bra005596 | NA | NA | Bol013458 | NA | NA | |
Bra018856 | NA | Bra030484 | NA | NA | NA | AT1G50520.1 | CYP705A27 | CYP705 | AT3G20130.1 | CYP705A22 | Bra035812 | NA | NA | Bol004752 | NA | NA | |
NA | Bra034021 | NA | NA | NA | NA | AT1G67110.1 | CYP735A2 | CYP735 | AT5G38450.1 | CYP735A1 | NA | NA | NA | Bol044541 | NA | NA | |
NA | Bra031222 | NA | NA | Bol044766 | NA | AT2G21910.1 | CYP96A5 | CYP96 | AT4G39490.1 | CYP96A10 | Bra007636 | NA | NA | Bol044573 | Bol037477 | NA | |
Bra030246 | NA | NA | Bol031784 | NA | NA | AT2G22330.1 | CYP79B3 | CYP79 | AT4G39950.1 | CYP79B2 | Bra037336 | NA | Bra008519 | Bol011517 | NA | Bol040623 | |
NA | Bra039189 | Bra000572 | NA | Bol044719 | Bol015032 | AT2G23190.1 | CYP81D7 | CYP81 | AT4G37370.1 | CYP81D8 | Bra013634 | Bra019366 | Bra020836 | Bol028535 | Bol042046 | Bol010650 | |
NA | Bra039330 | NA | NA | Bol021735 | NA | AT2G45550.1 | CYP76C4 | CYP76 | AT3G61040.1 | CYP76C7 | NA | NA | Bra010214 | NA | NA | Bol017469 | |
Bra004517 | Bra039267 | NA | Bol004912 | Bol021794 | NA | AT2G46660.1 | CYP78A6 | CYP78 | AT3G61880.1 | CYP78A9 | NA | NA | Bra005811 | NA | NA | Bol015369 | |
Bra029852 | NA | NA | Bol005847 | NA | NA | AT3G10570.1 | CYP77A6 | CYP77 | AT5G04660.1 | CYP77A4 | Bra028182 | NA | NA | Bol040164 | NA | NA | |
Bra013386 | Bra012551 | NA | Bol009338 | Bol024384 | NA | AT4G19230.1 | CYP707A1 | CYP707 | AT5G45340.1 | CYP707A3 | Bra025083 | Bra027602 | Bra021965 | Bol005615 | Bol032060 | Bol022856 | |
β | Bra026005 | Bra026692 | Bra016621 | Bol038280 | Bol009797 | Bol029295 | AT1G17060.1 | CYP72C1 | CYP72 | AT3G14690.1 | CYP72A15 | Bra027319 | Bra021572 | Bra001562 | Bol002804 | NA | NA |
Bra011755 | NA | NA | Bol028923 | NA | NA | AT4G37310.1 | CYP81H1 | CYP81 | AT5G67310.1 | CYP81G1 | Bra012152 | Bra037119 | NA | Bol027250 | NA | NA | |
Bra033251 | Bra032642 | NA | Bol040682 | Bol018470 | NA | AT1G01600.1 | CYP86A4 | CYP86 | AT2G45970.1 | CYP86A8 | Bra004951 | NA | NA | Bol030226 | NA | NA | |
γ | NA | Bra012006 | NA | NA | Bol013448 | NA | AT2G27690.1 | CYP94C1 | CYP94 | AT3G56630.1 | CYP94D2 | Bra007259 | NA | Bra003246 | Bol045464 | NA | Bol004209 |