Table 2 Number of mouse and E. falciformis mRNAs significantly differentially abundant in different comparisons (Contrasts)
Contrast | Number of E. falciformis mRNAs with FDR < 0.01 | Number of mouse mRNAs with FDR < 0.01 |
|---|---|---|
NMRI 7 dpi vs. uninfected control | 2711 | |
NMRI 5 dpi vs. uninfected control | 1804 | |
NMRI 3 dpi vs. NMRI 7 dpi | 1399 | 1322 |
C57BL/6 5 dpi vs. uninfected control | 919 | |
NMRI 7 dpi naïve vs NMRI 7 dpi challenge | 0 | 857 |
NMRI 5 dpi vs. NMRI 7 dpi | 2084 | 732 |
Rag1 −/− vs C57BL/6 | 362 | |
NMRI 3 dpi vs ctrl | 325 | |
C57BL/6 5 dpi naïve vs C57BL/6 5 dpi challenge | 0 | 175 |
Rag1 −/− 5 dpi vs control | 42 | |
NMRI 3 dpi naïve vs NMRI 3 challenge | 1 | 18 |
NMRI 3 dpi vs. NMRI 5 dpi | 103 | 0 |
NMRI 5 dpi vs. oocysts | 3691 | |
Sporozoites vs. oocysts | 3532 | |
NMRI 3 dpi vs. oocysts | 3303 | |
NMRI 7 dpi vs. oocysts | 3202 | |
NMRI 7 dpi vs. sporozoites | 2663 | |
NMRI 5 dpi vs. sporozoites | 1726 | |
NMRI 3 dpi vs. sporozoites | 1705 | |
NMRI control vs. C57BL/6 control | 13 |