Table 10 Functional Categories of the 20 most significant PD-related SNPs
SNPs | Functional Category | Allele | Region |
|---|---|---|---|
rs3750625 | transcriptional_regulation | C/A | 3 prime UTR |
rs1697406 | transcriptional_regulation | A/G | 3 prime UTR |
rs535860 | conserved | A/T | 3 prime UTR |
rs13198420 | none | T/C | 3 prime UTR |
rs12206712 | none | T/C | 3 prime UTR |
rs2762934 | transcriptional_regulation | A/G | 3 prime UTR |
rs3814309 | transcriptional_regulation, conserved | T/C | 3 prime UTR |
rs16843618 | transcriptional_regulation | G/C | 3 prime UTR |
rs3766286 | transcriptional_regulation, conserved | C/T | 3 prime near gene |
rs1050955 | transcriptional_regulation | G/A | downstream |
rs7242 | transcriptional_regulation | T/G | 3 prime UTR |
rs12281100 | none | A/C | downstream |
rs2242437 | none | C/G | upstream |
rs1042364 | protein_coding | A/G | 3 prime UTR |
rs1051881 | protein_coding, splicing_regulation, transcriptional_regulation, post_translation | G/C | nonsynonymous |
rs17085675 | transcriptional_regulation | A/T | 3 prime UTR |
rs1045968 | transcriptional_regulation | G/T | intron, 3 prime UTR |
rs281437 | transcriptional_regulation | C/T | 3 prime UTR |
rs3829972 | transcriptional_regulation | A/G | 3 prime UTR |
rs8067 | transcriptional_regulation | C/A | Regulatory region, 3 prime UTR |