Skip to main content

Table 2 The effect of Core_thresh on the DUPN_DIP

From: An uncertain model-based approach for identifying dynamic protein complexes in uncertain protein-protein interaction networks

Core_thresh

#Complexes

Precision

Recall

F-score

Sn

PPV

Accuracy

Core_thresh = 0

763

0.436

0.653

0.523

0.47

0.648

0.552

Core_thresh = 0.1

747

0.443

0.657

0.53

0.461

0.649

0.547

Core_thresh = 0.2

651

0.493

0.619

0.549

0.443

0.667

0.544

Core_thresh = 0.3

551

0.55

0.589

0.569

0.433

0.66

0.535

Core_thresh = 0.4

433

0.6

0.551

0.575

0.431

0.641

0.526

Core_thresh = 0.5

304

0.664

0.441

0.53

0.397

0.631

0.5

Core_thresh = 0.6

238

0.723

0.368

0.488

0.362

0.609

0.47

Core_thresh = 0.7

134

0.836

0.263

0.401

0.287

0.63

0.425

Core_thresh = 0.8

97

0.856

0.199

0.323

0.201

0.689

0.372

Core_thresh = 0.9

56

0.839

0.144

0.246

0.128

0.801

0.321

Core_thresh = 1.0

0

  1. The ‘#Complexes’ refers to the number of identified complexes with different Core_thresh. The highest value in each row is in bold