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Fig. 1 | BMC Genomics

Fig. 1

From: Lifestyle, gene gain and loss, and transcriptional remodeling cause divergence in the transcriptomes of Phytophthora infestans and Pythium ultimum during potato tuber colonization

Fig. 1

Overview of expression data. a images of uninfected tuber, tuber infected with Ph. infestans at 4 dpi, and tuber infected with Py. ultimum at 1.5 dpi. Ph. infestans-infected tubers are asymptomatic at 1.5 dpi. b Heatmaps of hierarchical clustered TMM-normalized data from artificial media and plant samples for Ph. infestans (top) and Py. ultimum (bottom). Only genes with CPM ≥1 in at least one condition are shown. c Expression of stage-specific markers in early, middle and late tuber samples of Ph. infestans. d and e Principal component analysis (PCA) displaying intrinsic biological variation between replicates of Ph. infestans and Py. ultimum samples. f log2 fold-change ratios in comparisons of early tuber versus early media, and late versus early tuber

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BMC Genomics

ISSN: 1471-2164

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