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Table 7 Significantly expressed A. niger N402 genes from cluster E in the expression profiling tree

From: Expression-based clustering of CAZyme-encoding genes of Aspergillus niger

 

Up/Down-regulatedc

Regulated by

 

Genea

Enzymeb

CAZy family

ΔxlnR

ΔaraR

ΔrhaR

ΔgalX

ΔamyR

This study

Literature

Reference

E-1

An15g04900 (eglD)

LPMO

AA9

2.1

−1.2

−1.7

−1.6

−1.8

nd

nr

[38]

An03g00190 (pelB)

PEL

PL1

–

–

–

1.2

1.0

nd

nr

[73]

E-2

An07g09760

BGL

GH3

–

–

–

–

–

nd

nr

[38]

An08g01100

EXG

GH5

1.6

1.1

1.1

–

3.8

nd

nr

[38]

An11g03200 (inuA/inuB)

INU

GH32

–

–

–

–

–

nd

InuR

[8, 79]

An12g08280 (inuE/inu1)

INX

GH32

2.9

2.0

1.9

5.2

4.1

nd

InuR

[8]

An02g04900 (pgaB)

PGA

GH28

2.6

−2.3

–

2.2

−2.1

nd

GaaR

[15, 34, 80]

An08g11070 (sucA/suc1)

SUC

GH32

–

–

–

–

–

nd

InuR

[9, 81, 82]

  1. aGenes with expression value of <50 in all studied A. niger N402 cultures are not included in the table
  2. bEnzyme codes are provided in Additional file 2
  3. cFold-change between A. niger N402 and the regulatory mutants grown on their relevant carbon source. - = expression value <50 in both N402 and regulatory mutant strain
  4. nd not detected, nr not reported
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BMC Genomics

ISSN: 1471-2164

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