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Table 7 Significantly expressed A. niger N402 genes from cluster E in the expression profiling tree

From: Expression-based clustering of CAZyme-encoding genes of Aspergillus niger

  Up/Down-regulatedc Regulated by
  Genea Enzymeb CAZy family ΔxlnR ΔaraR ΔrhaR ΔgalX ΔamyR This study Literature Reference
E-1 An15g04900 (eglD) LPMO AA9 2.1 −1.2 −1.7 −1.6 −1.8 nd nr [38]
An03g00190 (pelB) PEL PL1 1.2 1.0 nd nr [73]
E-2 An07g09760 BGL GH3 nd nr [38]
An08g01100 EXG GH5 1.6 1.1 1.1 3.8 nd nr [38]
An11g03200 (inuA/inuB) INU GH32 nd InuR [8, 79]
An12g08280 (inuE/inu1) INX GH32 2.9 2.0 1.9 5.2 4.1 nd InuR [8]
An02g04900 (pgaB) PGA GH28 2.6 −2.3 2.2 −2.1 nd GaaR [15, 34, 80]
An08g11070 (sucA/suc1) SUC GH32 nd InuR [9, 81, 82]
  1. aGenes with expression value of <50 in all studied A. niger N402 cultures are not included in the table
  2. bEnzyme codes are provided in Additional file 2
  3. cFold-change between A. niger N402 and the regulatory mutants grown on their relevant carbon source. - = expression value <50 in both N402 and regulatory mutant strain
  4. nd not detected, nr not reported