Table 2 Evaluation of TaxMapper. Comparison of area under the ROC curve (AUC) and accuracy (ACC) for the E-value cutoff (test data) and TaxMapper on test, holdout and random data. The cutoffs leading to the best results in ACC and a false positive rate below 0.1 are shown below
Method | Simple E-value cutoff | TaxMapper test | TaxMapper holdout | TaxMapper random |
|---|---|---|---|---|
AUC | 0.84 | 0.91 | 0.90 | NA |
ACC | 0.79 | 0.84 | 0.84 | 1.00 |
Cutoff for best ACC | -0.92 | 0.38 | 0.40 | 1.00 |
Cutoff for FPR < 0.1 | 1.66 | 0.58 | 0.58 | 0.29 |