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Table 9 Selected nucleotide pattern frequencies from mouse and zebrafish

From: A Support Vector Machine based method to distinguish long non-coding RNAs from protein coding transcripts

  GRCm38 and GRCz10
1 aa, aaa, ac, aca, acg
2 act, ag, aga, at, ata
3 atc, atg, att, ca, caa
4 cac, cag, cat, cc, cca
5 ccc, cg, cgc, ct, cta
6 ctc, ctg, ga, gag, gc
7 gcg, gg, ggg, gt, gtc
8 gtg, ta, tac, tag, tat
9 tc, tca, tcg, tct, tg
10 tga, tgt, tt, ttg, ttt
  1. GRCm38 and GRCz10 data sets were analyzed to identify the 50 pattern frequencies with the highest PCA loadings