Fig. 1

Circos plot of gene density, TE density, and methylation levels of CG, CHG and CHH context across each chromosome of switchgrass genome. Each MeDIP-seq replicate and BS-seq sample, by context, are displayed. The color key for MeDIP-seq rings indicates the density of peak numbers in each sample, not the methylation levels. The methylation signals detected by MeDIP are combinations of CG, CHG and CHH methylation. In BS-Seq each context is represented separately