Table 1 Divergence time estimates in Arabidopsis from past studies
| Â | Arabidopsis crown group | Arenosa/ Lyrata | LyrataNA/ LyrataEU | method | dataset | calibration |
|---|---|---|---|---|---|---|
Beilstein et al. (2010) [58] | 12.92 my | 8.17 my | NA | BEAST | ndhF/PHYA | fossils |
Hohmann et al. (2015) [3] | 5.97 my | 1.29 my | NA | BEAST | 73 cp genes | fossils |
Novikova et al. (2016) [25] | 5.72 my | 0.6 my | 0.34 my | BEAST | complete cp genome | secondary, based on Hohmann et al. (2015) [3] |
Koch et al. (2000) [59] | 5.1–5.4 my | NA | NA | Ks-simulation and permutation | Chs and Adh | synonymous substitution rate |
Pyhäjärvi et al. (2012) [40] | NA | NA | 69,000 generations (0.138 my assuming a 2-years generation time) | MIMAR | 19 nuclear loci | mutation rate from Ossowski et al. (2010) [60] |
Ross-Ibarra et al. (2008) [39] | NA | NA | 19–32 ky | ms | 77 nuclear loci | mutation rate from Koch et al. (2000) [59] |