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Table 1 Statistics of sequenced reads and contigs

From: Whole-genome assembly of Babesia ovata and comparative genomics between closely related pathogens

Assembly method Canu Canu Canu HGAP3
Subtraction of unreliable contigs Yes No No No
total base pairs 14,453,397 16,393,820 14,312,816 16,481,566
# of contigs 91 228 206 533
N50 contig length 2,090,503 2,093,449 408,732 97,655
N50 contig rank 3 3 11 48
max contig length 3,702,329 3,692,619 1,286,507 529,343
# of MinION raw reads 458,947 458,947 458,947 0
# of MinION total base pairs 1,592,957,533 1,592,957,533 1,592,957,533 0
# of PacBio sub reads 388,599 388,599 0 388,599
# of PacBio total base pairs 954,792,480 954,792,480 0 954,792,480