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Table 1 The miRNA triggers that are reported to target PHAS loci

From: Phased secondary small interfering RNAs in Panaxnotoginseng

miRNA

Length (nt)

PHAS Loci

Species

References

miR161.1/.2, miR400

21

PPR

Arabidopsis

[26]

miR171

21

SCL

P. notoginseng

[37] and this study

miR172

21

AP2

Medicago

[21]

miR173

22

TAS1/2

Arabidopsis

[17]

miR390

21

TAS3

land plants

[16, 17] and this study

miR828

22

TAS4

Arabidopsis, lotus

[23, 29]

miR828

22

MYB

apple, peach, lotus

[27–30]

miR1507, miR1515

22

DCL2

Medicago, soybean

[21]

miR2118, miR482, miR1507,

22

NB-LRR

legume, cotton, lotus,

[20, 21, 29, 31, 39, 40]

miR2109

  

tomato, P. notoginseng

and this study

miR2118, miR2275

22

lncRNAs

rice, maize

[3, 20, 24]

miR5754

22

Protein kinase

Medicago

[21]

miR7122, miR1509, miR173

22

PPR

eudicots

[21, 26, 28] and this study