Table 2 Conserved genes present in DSLPV1 and the prasinoviruses
From: The genome of a prasinoviruses-related freshwater virus reveals unusual diversity of phycodnaviruses
| Â | Gene name | OtV5 | MpV1 | BpV1 | BpV2 | DSLPV1 |
|---|---|---|---|---|---|---|
NCLDV core gene | DNA polymerase | 1 | 1 | 1 | 1 | 1 |
ATPase (DNA packaging) | 1 | 1 | 1 | 1 | 1 | |
A18 helicase | 1 | 1 | 1 | 1 | 1 | |
Capsid protein | 8 | 8 | 7 | 7 | 7 | |
Serine/Threonine protein kinase | 1 | 1 | 1 | 1 | 0 | |
NCVOGs present in prasinoviruses | Poxvirus late transcription factor VLTF3 | 1 | 1 | 1 | 1 | 1 |
DNA topoisomerase | 2 | 1 | 1 | 1 | 2 | |
Transcription factor IIS | 1 | 1 | 1 | 1 | 1 | |
Transcription factor IIB | 1 | 1 | 1 | 1 | 1 | |
Ribonucleotide reductase small subunit | 1 | 1 | 1 | 1 | 1 | |
Ribonucleotide diphosphate reductase large subunit | 1 | 1 | 1 | 1 | 1 | |
mRNA capping enzyme | 2 | 2 | 2 | 2 | 2 | |
ATP dependant DNA ligase | 1 | 1 | 1 | 1 | 0 | |
Exonuclease (YqaJ) | 2 | 2 | 2 | 2 | 1 | |
dUTP pyrophosphatase | 1 | 1 | 1 | 1 | 0 | |
Thymidine kinase | 1 | 1 | 1 | 1 | 0 | |
Thymidylate S | 1 | 1 | 1 | 1 | 0 | |
Nudix hydrolase | 1 | 1 | 1 | 0 | 1 | |
RuvC, Holliday junction resolvases, Extended Pox_A22, Poxvirus A22 family | 2 | 2 | 1 | 1 | 2 | |
Other prasinovirus common genes | PCNA | 1 | 1 | 1 | 1 | 1 |
NTPase/helicase | 1 | 1 | 1 | 1 | 1 | |
RNase H | 1 | 1 | 1 | 1 | 1 | |
RNase III | 1 | 1 | 1 | 1 | 1 | |
Transcription activator /SWI/SNF helicase | 1 | 1 | 1 | 1 | 0 | |
TATA-box binding protein (TBP) | 1 | 1 | 1 | 1 | 1 | |
Prolyl 4-hydroxylase | 1 | 1 | 1 | 1 | 1 | |
33Â kDa in vitro translation peptide | 2 | 3 | 2 | 2 | 2 | |
2OG-Fe(II) oxygenase | 1 | 1 | 1 | 1 | 1 | |
Aspartyl/Asparaginyl beta-hydrolase | 1 | 1 | 1 | 1 | 0 | |
Ubiquitin hydrolase-like cystein peptidase | 1 | 1 | 1 | 1 | 1 | |
FtsH (3–4-24) metalloendopeptidase | 1 | 1 | 1 | 1 | 1 | |
ATP-dependant protease proteolytic subunit | 1 | 1 | 1 | 1 | 1 | |
Patatin-like phospholipase | 1 | 1 | 1 | 1 | 1 | |
Potassium channel protein, PhoH | 1 | 1 | 1 | 1 | 1 | |
ABC-1 domain protein | 1 | 1 | 1 | 1 | 1 | |
ATP/GTP binding site motif A AGB-1 | 1 | 1 | 1 | 1 | 1 | |
Viral A-type inclusion protein | 1 | 1 | 1 | 1 | 1 |