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Fig. 3 | BMC Genomics

Fig. 3

From: Comparison of three assembly strategies for a heterozygous seedless grapevine genome assembly

Fig. 3

Top hits length of AP and PLAT*_GC Sultanina assemblies with V. vinifera reference genome (PN40024 12X.v2). Outer ring = chromosomes of reference genome V. vinifera (PN40024 12X.v2); Second ring = SNP calls histogram (purple) for each chromosome (variants by chromosome relative to the V. vinifera (PN40024 12X.v2) reference genome in 100 kbp bins). The 2 inner most rings represent 95% identity of 1 kbp alignment length for AP assembly (third ring, green), and PLAT*_GC (fourth ring, blue). The red bars in the third and fourth rings represent 100% identity and minimum 1000 bp alignment with V. vinifera reference genome (details are in Table 2)

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