Genetical genomics of growth in a chicken model

BMC Genomics

Table 1 QTL with estimates and position

Chr	cM	Mb	LOD	Trait	a	SE	d	SE	a_by_sex	SE	d_by_sex	SE	Interactions	Interval start (Mb)	Interval end (Mb)	Variance explained (%)
1	509	34	27.0	w42	19.9	2.1	9.6	2.7						28.9	34.7	4.0
1	510	34	5.5	g112.212	31.4	6.4	−4.8	8.0						28.9	34.7	2.0
1	510	34	42.4	w112	83.3	13.3	64.3	16.6	−34.9	13.0	0.6	17.6	1@510.0:27@68.2	28.9	34.7	9.0
1	510	34	43.6	w212	159.8	13.1	15.6	17.1	−75.4	16.8	35.9	23.2		28.9	34.7	8.4
1	512	35	35.3	g42.112	85.3	7.9	14.2	10.2	−47.4	10.0	20.1	14.0		28.9	34.7	7.0
1	1138	81	4.3	w112	−25.6	6.0	−7.0	8.0						77.6	85.0	0.8
1	1137	81	5.1	g42.112	−23.1	5.2	−9.0	6.9						78.6	85.0	0.9
2	158	18	9.4	g112.212	1.2	7.1	−6.5	9.4					11@4.0:2@158.0	16.7	19.3	3.4
2	255	34	5.2	w42	12.6	3.8	−27.7	6.8	−8.8	5.3	29.1	9.3		29.0	39.1	0.7
3	631	93	7.5	w42	−19.8	4.5	−7.2	6.8	8.7	5.7	−6.7	8.9		92.6	95.1	1.0
4	265	31	8.6	w212	7.8	9.8	19.0	12.3					4@265.0:24@14.1	30.2	32.9	1.4
4	493	76	11.7	g42.112	−9.2	7.6	−7.3	9.7	30.7	9.3	−28.2	13.4	4@493.0:17@169.0	73.8	79.3	2.1
6	207	21	5.0	w212	26.2	8.2	29.3	11.1						16.0	21.6	0.8
6	259	27	13.8	g42.112	15.5	5.5	53.4	7.6					6@259.0:12@66.0	25.5	29.9	2.5
6	258.7	27	9.0	w112	26.6	13.1	37.3	14.5					27@68.2:6@258.7	25.5	29.9	1.6
10	177	12	4.4	w42	8.8	2.4	8.2	2.9						11.1	15.1	0.6
11	4	1	9.2	g112.212	−5.1	6.9	−16.6	9.1					11@4.0:2@158.0	1.3	3.8	3.4
12	66	5	8.6	g42.112	12.2	7.2	−35.5	10.0					6@259.0:12@66.0	2.7	17.4	1.5
12	64	5	4.4	w212	34.7	10.2	−19.8	14.4						2.7	5.9	0.7
17	169	9	8.3	g42.112	20.6	6.0	−25.5	8.7					4@493.0:17@169.0	7.2	9.5	1.5
23	147	5	4.8	w112	−31.0	7.0	7.4	11.1						3.5	4.7	0.9
23	154.9	5	3.8	g42.112	−20.4	5.1	0.8	6.8						3.5	4.7	0.7
24	14.1	1	9.5	w212	1.1	9.0	−38.1	10.9					4@265.0:24@14.1	1.1	1.5	1.5
27	68.1	3	4.2	w212	37.8	11.1	−1.7	13.3						2.4	3.4	0.7
27	68.2	3	9.6	w112	43.6	15.0	19.2	16.1					1@510.0:27@68.2 27@68.2:6@258.7	2.4	4.7	1.8

Columns indicate the trait, the location of the QTL (in cM and Mb), the LOD score for the QTL, the additive and dominance estimates with standard errors, the coefficients for additive and dominance by sex interactions with standard errors, epistatic pairs that the QTL contribute to, the limits of the QTL confidence interval (in Mb), and the variance explained

ISSN: 1471-2164