Skip to main content

Table 2 Performance evaluations by varying shared and error rates. The length of each haplotype is 1,300 bp. Each dataset contain 30 samples. Each sample contains contiguous subsequence of 4 broken haplotypes

From: Efficient algorithms for polyploid haplotype phasing

Dataset % Shared % Error rate % Sensitivity Time in seconds
D1 100 0 100.00 19.51
D2   1 100.00 22.02
D3   5 100.00 25.75
D4   10 96.67 35.13
D5   20 96.67 25.88
D6 80 0 96.67 25.53
D7   1 91.66 25.69
D8   5 91.66 26.20
D9   10 94.16 23.51
D10   20 90.00 12.33
D11 60 0 82.50 23.44
D12   1 76.67 19.45
D13   5 72.71 10.49
D14   10 77.50 9.91
D15   20 71.50 12.04