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Table 1 RNA sample details including quality and concentration measurements

From: Transcriptome profiling of lentil (Lens culinaris) through the first 24 hours of Ascochyta lentis infection reveals key defence response genes

Sample ID HPIa Cultivar Treatmentb Replicate RQIc RNA conc. (ng/ μL)
1C 2 ILL6002 Mock 1 9.5 504.93
2C 2 ILL6002 Mock 2 9.5 477.45
3C 2 ILL6002 Mock 3 9.4 359.48
4C 2 ILL6002 Treated 1 9.4 390.33
5C 2 ILL6002 Treated 2 9.4 461.47
6C 2 ILL6002 Treated 3 9.1 214.97
7C 2 ILL7537 Mock 1 9.5 316.84
8C 2 ILL7537 Mock 2 9.4 348.37
9C 2 ILL7537 Mock 3 9.6 281.67
10C 2 ILL7537 Treated 1 9.9 325.65
11C 2 ILL7537 Treated 2 9.4 317.97
12C 2 ILL7537 Treated 3 9.6 211.23
13C 6 ILL6002 Mock 1 10.0 263.26
14C 6 ILL6002 Mock 2 10.0 359.14
15C 6 ILL6002 Mock 3 10.0 157.02
16C 6 ILL6002 Treated 1 10.0 165.98
17C 6 ILL6002 Treated 2 10.0 236.68
18C 6 ILL6002 Treated 3 10.0 260.98
19C 6 ILL7537 Mock 1 10.0 210.47
20C 6 ILL7537 Mock 2 10.0 222.57
21C 6 ILL7537 Mock 3 10.0 296.11
22C 6 ILL7537 Treated 1 10.0 275.24
23C 6 ILL7537 Treated 2 10.0 221.47
24C 6 ILL7537 Treated 3 10.0 275.41
25C 24 ILL6002 Mock 1 9.7 511.10
26C 24 ILL6002 Mock 2 9.7 303.83
27C 24 ILL6002 Mock 3 9.6 467.35
28C 24 ILL6002 Treated 1 9.6 407.76
29C 24 ILL6002 Treated 2 9.5 336.80
30C 24 ILL6002 Treated 3 9.7 263.37
31C 24 ILL7537 Mock 1 9.8 338.72
32C 24 ILL7537 Mock 2 9.7 340.26
33C 24 ILL7537 Mock 3 9.7 550.03
34C 24 ILL7537 Treated 1 9.8 317.72
35C 24 ILL7537 Treated 2 9.8 414.79
36C 24 ILL7537 Treated 3 9.8 481.03
  1. aHours post inoculation
  2. bSample treatment: Treated – inoculation with highly pathogenic isolate of A. lentis ALP2; Mock – water spray as a negative control
  3. cRNA quality indicator (RQI), as determined by an Experion RNA Analysis System (Bio-Rad)
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BMC Genomics

ISSN: 1471-2164

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