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Table 5 Key genes in lentil defence-response to A. lentis

From: Transcriptome profiling of lentil (Lens culinaris) through the first 24 hours of Ascochyta lentis infection reveals key defence response genes

Functional groups Defence gene name Gene abbreviation Dominant genotypea
Recognition: Receiving & signalling molecules Calmodulin domain protein kinase-like CDPK-like  
  LRR receptor-like kinase LRR-RK ILL6002
  Receptor-like serine/ threonine protein kinase 1 R-S/T-K1  
  NB-ARC domain disease resistance protein NB-ARC ILL7537
  Botrytis susceptible interactor E3 ubiquitin protein ligase UPL-BOI  
Early structural response: Papilla formation Exocyst subunit 70A1 protein EXO70A1  
  Laccase diphenol oxidase PPOl  
  Delta (12)-fatty-acid desaturase Delta (12)-FAD ILL7537
  Xyloglucan endotransglucosylase/ hydrolase XTH ILL6002
Early Biochemical response: Pathogenesis-related & anti-fungal compounds PR protein 2 – O-glycosyl hydrolase PR2 ILL7537
  PR protein 4 – Thaumatin family PR4  
  PR protein 10 – Bet V I type PR10 ILL6002
  Plant invertase pectin methylesterase inhibitor PMEI  
  Auxin-repressed protein ARP ILL7537
  Polygalacturonase inhibitor PGIP ILL7537
  Superoxide dismutase SOD ILL7537
Regulation of defence-related transcripts: DNA & RNA binding proteins Ethylene response factor ERF  
  Heterogeneous nuclear ribonucleoprotein RNA binding motif RBP-hnRNP ILL7537
  Senescence associated gene SAG  
Hypersensitive response: Cell death & SAR RING/U-box E3 ubiquitin protein ligase RING/ U-box  
  Gibberellin signalling DELLA protein DELLA ILL7537
  Gibberellin receptor GID1 ILL7537
  E3 ubiquitin-protein ligase SHPRH UPL-SHPRH  
  1. aDominant genotype was specified for genes whose expression was generally up-regulated at all time points in one of the genotypes: ILL7537 – Resistant, ILL6002 – Susceptible