Table 1 Primers used for qPCR
From: Transcripts within rod photoreceptors of the Zebrafish retina
Gene | Sense Primer 5′ - > 3′ | Anti-sense Primer 5′- > 3′ |
|---|---|---|
aipl1 | TCCAGTCAGTCTTTACAC | CCTTAGTTCCAGTCACAA |
ajap1 | GGAGTAAGGTGTCTAACT | TTCCTGATATTCGTCCAT |
apoc1l | CCCAATTACCTTGTGTTT | ACAGTGTGACTTTGTATTG |
atat1 | CTAATGTGAATCTGCTATA | ACTCAAGTTACTATCCAA |
bbs4 | ACCACATTAGGACTGCTG | TCATAGGTCAGAGCGTTTC |
cabp4 | AGTTCGTTATGATGTTGTCTCT | CTATGATGATCCGCCACTG |
cobl | TCTAACCATACAGCAGAATCCA | GTCCAGGCGACAACATTG |
cry3 | TTACTCTTCTGGATTTCC | ATATAAACACACCGTACA |
dscamb | AAGAAGATGGTCTGACTC | CAAGGGAAAGCAAGTATT |
egf | TAAGTGAGTGGACAATGTT | GTCTTCGTGTTCCATCTA |
enc1 | ACGAGTCAGTATATTTCT | GTAAGTAACGAGCCTATA |
esrrb | CGTCTCCTCATACTTCAG | TCCTCCACTCTATTAGCA |
esrrd | CATGACCTTATGTGACCTT | CAGAAACCTGGTATGTGT |
gc2 | CTGTGTTAATTGGTGGAA | AGAGTATCGTAGGACATAA |
gc3 | CTCTATTCACTGCCATAT | CATGGTTACTGTTAAGAC |
gngt1 | AATCCATTCATTCAACACAACAT | ACTTCCATCTTCGCCTTATC |
gucy2f | TAGCATTACACTATGGATT | GCCTATGATTCCTACTTT |
kcnv2a | GCAGGAGTTAAGTAAGGATAT | TAGGAGTGGAGAACAGTC |
kita | AATAAGCTTGCCGCCACCATGGAATATCACTGCGTTCT | CAAATATTTGTAGGTGAGCACAATCAGGATGAGAAC |
lingo1a | TGCTTGTACGGATTGAAT | ATGTTGAGGAAACGAAGA |
Lplastin | GCAGTGGGTGAACGAAACAC | TCGAGATCGCATACTTGGCG |
mef2ca | TGTAATCATTCAGCGTAGTG | TCTAAGGTGTGCCGTTAT |
mef2cb | CCCGTGAATAACCAGATC | GTGACATGCTGTTTCTTT |
mpeg1.1 | CGGGTTCAAGTCCGTAACCA | TGGCGTCAGCGATTTCTTCT |
msi1 | CGAGCCCAGCCTAAGTTG | ATCTTCAATAGTCGTGTTCACTGA |
ncam1b | AGTTTGATAAAGATGTTCGTTTC | TTAATGCTGCGGAAGTCA |
ngf | GAGAAGACTACAAGCGAAT | CGACAACAATAAGGAGGAT |
nr1d4a | AATCATCTTATCGCACAAC | ATAGTAGTAGGTAGTAGGAGTA |
nr1d4b | AACGGTCACTATAACTTC | GAATAGCTGTTGTGTTTAG |
nr2f1b | TGAGAAGAACACAGAGTAA | AGGATTGCTGACTATAACA |
nrl | GATGGTCAGAGGAGAATG | GGTTGTAACGAGTGCTTA |
nucb2b | ATGATATGGTGGAGATGGA | CTTGTTCGTGGCAGTAAT |
panx1b | GCAGAGTGATTCTAAGTA | GAGTGAGATGAGTAACAA |
pdca | TGCCGATGTGGAATAATCAGA | ACAGCGTCATTACTCATTCTATCT |
ppdpfa | TAGCGTTTACCCGACCAA | TTTCCCCGTCCTCTAAAG |
prom1b | CAGTTGGAGTGACAGTTG | TCAGGTCTCTTATGTTGGT |
rtn2a | GGACACATAGACACAGACAA | CCTTCCAGTAGACCAGGT |
rho | ACTTCCGTTTCGGGGAGAAC | GAAGGACTCGTTGTTGACAC |
rhol | GCTGTGAGATGCTGGATT | GTTGTTGTTGTTGTTGTTGTC |
rims3 | AGAGGAGGTCAGTTAGAG | TATATGTTGCTGGAATGTTC |
rxrga | TTCACACTGGTCATTCAA | AAGGCATTATAGAGCGATT |
rxrgb | ACATAATACAGACAGAGACT | TAATAGCACAAGACAGAATC |
thrb | TCTGGTCTGATGAGTCTA | GTATTAGCCTGGTGATGA |
tprn | CAAACAACAAACATATAATCAAGT | TCTGAATGGTCGTGAATG |
tulp1b | CAAGGAATCAACAGAGAAG | CATCATCATCATCGTCATC |
sept8b | CTATCGTGGACTACATTGA | ATGAAGTACAGGCAGATG |
znf536 | CAATGGACAGAATTTAGGAATCA | CACAAAGAGGACAGGGATAT |
18S | GAACGCCACTTGTCCCTCTA | GTTGGTGGAGCGATTTGTCT |