Table 1 Potato PTB orthologues in five storage root crops
Crops | StPTB1/6 types (StPTB1-PGSC0003DMG400018824) (StPTB6-PGSC0003DMG400023660) | Coverage (%) | Identity (%) | No. of conserved RRMs | No. of PTB1/6 types | No. of PTB7 types |
|---|---|---|---|---|---|---|
Cassava (Manihot esculants) | Manes.18G093400.1 Manes.02G181600.1 Manes.14G018200.1 Manes.05G170900.1 | 99 99 94 43 | 84 83 42 28 | 4 4 3 3 | 2 | 2 |
Sugar beet (Beta vulgaris) | XP_010681101.1 XP_010680298.1 XP_010693257.1 XP_010671511.1 KMT16075.1 XP_010693256.1 | 99 99 97 61 61 97 | 80 72 32 42 42 31 | 4 4 3 3 3 3 | 2 | 4 |
Raddish (Raphanus sativus) | XP_018451916.1 XP_018441449.1 XP_018441450.1 XP_018472559.1 XP_018488837.1 XP_018488838.1 XP_018488836.1 XP_018463656.1 | 99 98 90 64 93 89 93 93 | 80 28 32 42 31 32 29 31 | 4 3 3 3 3 3 3 3 | 1 | 7 |
Carrot (Daucus carota) | XP_017247842.1 XP_017241710.1 XP_017242965.1 XP_017246841.1 KZM98104.1 KZN02333.1 | 99 61 91 91 91 60 | 85 43 30 30 30 43 | 4 3 3 3 3 3 | 1 | 5 |
Sweet potato (Ipomoea trifida) | itf09g10450.t1 itf05g19430.t1 itf05g16040.t1 itf12g25960.t1 itf05g19430.t2 | 100 91 76 68 91 | 88 31 41 41 30 | 4 3 3 3 3 | 1 | 4 |