Table 4 BUSCO analysis report comparing completeness of different teleost genomes
Species | Database | Assembly | BUSCO database | Complete | Duplicated | Fragmented | Missing | n |
|---|---|---|---|---|---|---|---|---|
Austrofundulus limnaeus | NCBI | GCA_001266775.1 | vertebrata | 75% | 1.6% | 12% | 11% | 3023 |
Nothobranchius furzeri (FLI) | NCBI | GCA_001465895.2 | vertebrata | 76% | 1.3% | 13% | 9.3% | 3023 |
Nothobranchius furzeri (Stanford) | NCBI | GCA_000878545.1 | vertebrata | 73% | 1.8% | 15% | 11% | 3023 |
Danio rerio | Ensembl | GRCz10 | vertebrata | 80% | 3.4% | 12% | 6.1% | 3023 |
Fundulus heteroclitus | NCBI | GCA_000826765.1 | vertebrata | 80% | 1.8% | 11% | 8.3% | 3023 |
Gadus morhua | Ensembl | gadMor1 | vertebrata | 69% | 1% | 17% | 13% | 3023 |
Gasterosteus aculeatus | Ensembl | BROAD S1 | vertebrata | 85% | 2.3% | 9.70% | 4.8% | 3023 |
Kryptolebias marmoratus a | – | – | vertebrata | 76.5% | 1.6% | 10.20% | 13.3% | 3023 |