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Table 2 Unique genes in L. casei ATCC393, L. gallinarum HDF4 and in L. delbrueckii strains as identified with GhostKOALA functional categories

From: Clustering of Pan- and Core-genome of Lactobacillus provides Novel Evolutionary Insights for Differentiation

KEGG orthology L. casei ATCC393 L. gallinarum HDF4 L. delbruecki bulgaricus clade L. delbrueckii diverse clade
Carbohydrate metabolism 11 5 7 1
Energy metabolism 0 0 2 1
Lipid metabolism 0 2 3 0
Nucleotide metabolism 1 0 0 1
Amino acid metabolism 1 3 3 3
Metabolism of other amino acid 1 0 0 0
Glycan biosynthesis and metabolism 2 0 0 0
Metabolism of cofactors and vitamins 0 3 0 1
Metabolism of terpenoids and polyketides 0 1 0 0
Biosynthesis of other secondary metabolites 0 1 0 0
Xenobiotics biodegradation and metabolism 0 0 3 0
Enzyme families 2 1 0 0
Genetic Information Processing 2 11 1 1
Environmental Information Processing 7 9 6 0
Cellular Processes 5 6 3 0
Organismal Systems 1 0 0 0
Human Diseases 1 2 2 0
Unclassified 5 9 0 1
Annotated KEGG orthologous 27a 38a 12a 5
Hypothetical function 186 143 30 5
Query dataset 213 181 42 10
  1. aKEGG orthologous can be present in single or multiple categories