Table 6 Comparison of genome assemblies and mapped genomes for malaria mosquitoes
Species | Original assembly | Total scaffolds | Mapped scaffolds | Scaffold N50, bp | Total length, Mb | Mapped length, Mb | Mapped, % | Reference |
|---|---|---|---|---|---|---|---|---|
An. albimanus | AalbS1 | 204 | 40 | 18,068,499 | 170.5 | 167.4 | 98.2 | [25] |
An. atroparvus | AatrE1 | 1371 | 56 | 9,206,694 | 224.3 | 200.9 | 89.6 | This study |
An. arabiensis | AaraD1 | 1214 | 50 | 5,604,218 | 246.6 | 216.3 | 87.7 | [56] |
An. gambiae | AgamP3 | 8 | 5 | 49,364,325 | 273.1 | 230.2 | 84.3 | [43] |
An. stephensi | AsteI2 | 23,371 | 86 | 1,591,355 | 221.3 | 137.14 | 62 | [14] |
An. stephensi | AsteS1 | 1100 | 101 | 837,295 | 225 | 92.83 | 41 | [24] |
An. sinensis | AsinC2 | 9592 | 52 | 814,231 | 220.8 | 79.3 | 35.9 | [23] |
An. funestus | AfunF1 | 1392 | 103 | 671,960 | 225.2 | 79.0 | 35.1 | [24] |