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Table 5 The most reliable top ten significantly enriched pathways of DEGs under low temperature treatments

From: Transcriptome analysis of chrysanthemum (Dendranthema grandiflorum) in response to low temperature stress

  Pathway ID Pathway DEGs in pathway All genes in pathway P-value
CP1 ko03008 Ribosome biogenesis in eukaryotes 47 137 5.59E-13
ko00196 Photosynthesis - antenna proteins 20 64 3.19E-09
ko00940 Phenylpropanoid biosynthesis 38 233 2.53E-07
ko00500 Starch and sucrose metabolism 42 301 4.29E-06
ko00052 Galactose metabolism 17 104 0.0005392
ko00400 Phenylalanine, tyrosine and tryptophan biosynthesis 13 78 0.0019789
ko00906 Carotenoid biosynthesis 8 38 0.0032878
ko00130 Ubiquinone and other terpenoid-quinone biosynthesis 10 66 0.0123906
ko00603 Glycosphingolipid biosynthesis - globo series 3 8 0.0132652
ko00360 Phenylalanine metabolism 17 143 0.0156871
CP2 ko03008 Ribosome biogenesis in eukaryotes 31 137 4.55E-09
ko00196 Photosynthesis - antenna proteins 20 64 7.76E-09
ko04626 Plant-pathogen interaction 45 272 5.72E-08
ko00940 Phenylpropanoid biosynthesis 29 233 0.0020767
ko00564 Glycerophospholipid metabolism 20 149 0.0042047
ko00360 Phenylalanine metabolism 19 143 0.0058143
ko00052 Galactose metabolism 15 104 0.0064176
ko00500 Starch and sucrose metabolism 33 301 0.0079662
ko04075 Plant hormone signal transduction 38 360 0.0084879
ko00740 Riboflavin metabolism 3 8 0.0152681
CP3 ko00196 Photosynthesis - antenna proteins 28 64 0
ko04626 Plant-pathogen interaction 33 272 5.61E-06
ko04075 Plant hormone signal transduction 39 360 1.24E-05
ko00860 Porphyrin and chlorophyll metabolism 14 77 4.17E-05
ko04712 Circadian rhythm - plant 11 55 0.0001138
ko00906 Carotenoid biosynthesis 8 38 0.0006843
ko00195 Photosynthesis 15 114 0.0009170
ko00740 Riboflavin metabolism 3 8 0.0067278
ko00591 Linoleic acid metabolism 6 36 0.0106150
ko00564 Glycerophospholipid metabolism 14 149 0.0256548