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Table 1 False positive and false negative values of SWGIS v2.0 calculated for different naïve chromosomes

From: EuGI: a novel resource for studying genomic islands to facilitate horizontal gene transfer detection in eukaryotes

  False positive a False negative
C. albicans NW_139454 16% 5.67%
C. albicans NW_139474 0% 7.73%
T. pseudonana NC_012068 0% 30.93%
T. pseudonana NC_012069 0% 30.41%
T. delbrueckii NC_016501 1% 16.49%
T. delbrueckii NC_016504 2% 21.13%
P. tricornutum NC_011690 11% 24.74%
P. tricornutum NC_011693 1% 29.90%
  1. aRandom chromosome fragments were moved from the other chromosome of the same organism (e.g. for NW_139454 random fragments were moved from NW_139474 to NW_139454 and vice versa for NW_139474)