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Table 2 Total and selected significant (P < 0.001) enriched Gene Ontology terms (GOs) of the differentially transcribed genes across the different studied life-cycle stages including genes of E1 from maternal origin (E1F3). N, %Cov are number of probes and coverage. Further details are in Additional file 4. Stage abbreviations are explained in text

From: Differential gene transcription across the life cycle in Daphnia magna using a new all genome custom-made microarray

Acession GO Term E1 E1F3 E3 J F1 F2 F3 F123 M
Total number   1380 829 1323 97 145 146 91 1004 27
   N % Cov N %Cov N % Cov N % Cov N % Cov N % Cov N % Cov N % Cov N % Cov
GO:0002176 male germ cell proliferation                  9 0.5
GO:1901476 carbohydrate transporter activity              24 1.5    29 1.6
GO:0042302 structural constituent of cuticle      111 2.1    135 13.1 57 3.6 37 2.3    48 2.7
GO:0009838 abscission              10 0.6     
GO:0097493 struct molec act conferring elasticity      83 1.6    97 9.4 51 3.3 30 1.9     
GO:0032993 protein-DNA complex 218 2 93 1.6          39 2.5 107 1.7   
GO:0042445 hormone metabolic process      223 4.2        81 5.1     
GO:0048856 anatomical structure development 7415 68.7    3697 69.8        1128 71.5 4449 70.8   
GO:0044851 hair cycle phase            14 0.9       
GO:0048180 activin complex          5 0.5         
GO:0022611 dormancy process          14 1.4         
GO:0031395 bursicon neuropeptide hormone complex        11 0.6           
GO:0072562 blood microparticle      55 1             
GO:0042562 hormone binding      88 1.7             
GO:0007626 locomotory behavior      337 6.4             
GO:0004872 receptor activity      418 7.9             
GO:0097458 neuron part      1135 21.4          1186 18.9   
GO:0071944 cell periphery      2158 40.8          2529 40.3   
GO:0042221 response to chemical      2366 44.7             
GO:0009653 anatomical structure morphogenesis 4718 43.7 261.5 44.7 2370 44.8          2959 47.1   
GO:0044767 single-organism developmental process 7414 68.7    3683 69.6          4523 72.1   
GO:0002200 somatic diversification of immune receptors 70 0.6                 
GO:0002262 myeloid cell homeostasis 172 1.6                 
GO:0030496 midbody 217 2 154 2.6               
GO:0002253 activation of immune response 370 3.4                 
GO:0032259 methylation 663 6.1 394 6.7               
GO:0000989 transc fact act, transcription factor binding 704 6.5                 
GO:0000785 chromatin 783 7.3                 
GO:0002520 immune system development 914 8.5                 
GO:0008283 cell proliferation 1924 17.8              1174 18.7   
GO:0016265 death 2139 19.8                 
GO:0003006 developm proc. involved in reproduction 2267 21                 
GO:0048646 anatomical struct form morphogenesis 2681 24.9              1689 26.9   
GO:0044085 cellular component biogenesis 4056 37.6                 
GO:0006950 response to stress 4684 43.4              2793 44.5   
GO:0006807 nitrogen compound metabolic process 5825 54 3322 56.8               
GO:0044422 organelle part 6354 58.9                 
GO:0016043 cellular component organization 6437 59.7