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Table 3 The common differentially expressed genes enriched in PPAR signaling pathway or ECM–receptor interaction

From: Transcriptome analysis of adipose tissues from two fat-tailed sheep breeds reveals key genes involved in fat deposition

Pathway Gene information from NCBI website Expression ration
Gene ID Gene name Gene annotation STHPEF/GLTPEF STHSUF/GLTSUF STHTAF/GLTTAF
PPAR signaling pathway 101,102,230 LOC101102230 platelet glycoprotein 4-like, FATCD36 Up Up Up
101,115,982 PLTP phospholipid transfer protein Up Up Up
101,117,918 OLR1 oxidized low density lipoprotein receptor 1 Up Up Up
101,105,159 C1QTNF7 C1q and tumor necrosis factor related protein 7 Up Up Up
101,104,743 SLC27A6 solute carrier family 27 member 6 Down Up Up
101,104,317 ANGPTL4 angiopoietin like 4 Down Up Up
101,108,615 FADS2 fatty acid desaturase 2 Up Down Down
443,185 SCD stearoyl-CoA desaturase Down Down Down
494,434 UCP-1 uncoupling protein 1 Down Down Down
ECM-receptor interaction 101,105,176 LAMB3 laminin subunit beta 3 UP UP UP
101,120,658 RELN reelin UP UP UP
100,820,740 TNXB tenascin XB UP UP UP
101,117,689 ITGA8 integrin subunit alpha 8 UP UP UP
101,106,520 LAMB4 laminin subunit beta 4 Down Down Down
  1. The differentially expressed (DE) genes listed in this table were common in the comparisons, GLTPEF vs. STHPEF, GLTSUF vs. STHSUF, and GLTTAF vs. STHTAF. The PPAR signaling pathway and ECM–receptor interaction were enriched through KEGG pathway analysis. The gene expression level was evaluated by RPKM. The ratio was defined as the RPKM value of a gene in one tissue of STH to that in the corresponding tissue of GLT