Features | RMSE (all) | RMSE (int.) | AUROC | AUPRC | Accuracy |
---|---|---|---|---|---|
Nearest non-missing upstream and downstream neighboring beta values and distances (N) | 0.15046 ± 0.00940 | 0.21429 ± 0.01133 | 0.94983 ± 0.00774 | 0.98595 ± 0.00337 | 0.93743 ± 0.01065 |
Sample average (A) | 0.09594 ± 0.00478 | 0.14304 ± 0.00649 | 0.98954 ± 0.00177 | 0.99424 ± 0.00486 | 0.96237 ± 0.00464 |
A, N | 0.09330 ± 0.00461 | 0.13768 ± 0.00620 | 0.99019 ± 0.00160 | 0.99769 ± 0.00049 | 0.96389 ± 0.00457 |
A, N, transcription factor binding sites | 0.09333 ± 0.00459 | 0.13776 ± 0.00617 | 0.99018 ± 0.00159 | 0.99769 ± 0.00049 | 0.96384 ± 0.00457 |
A, N, recombination rate | 0.09330 ± 0.00462 | 0.13774 ± 0.00621 | 0.99018 ± 0.00160 | 0.99769 ± 0.00049 | 0.96386 ± 0.00459 |
A, N, ATAC-seq peaks (P) | 0.09327 ± 0.00461 | 0.13768 ± 0.00620 | 0.99019 ± 0.00160 | 0.99769 ± 0.00049 | 0.96389 ± 0.00457 |
A, N, histone marks (H) | 0.09322 ± 0.00461 | 0.13758 ± 0.00619 | 0.99020 ± 0.00159 | 0.99769 ± 0.00049 | 0.96393 ± 0.00456 |
A, N, GENCODE annotations (G) | 0.09323 ± 0.00461 | 0.13759 ± 0.00619 | 0.99019 ± 0.00159 | 0.99769 ± 0.00049 | 0.96390 ± 0.00457 |
A, N, chromatin states (C) | 0.09318 ± 0.00461 | 0.13759 ± 0.00619 | 0.99019 ± 0.00159 | 0.99769 ± 0.00049 | 0.96390 ± 0.00457 |
A, N, P, H, G, Ca | 0.09311 ± 0.00459 | 0.13735 ± 0.00616 | 0.99022 ± 0.00158 | 0.99770 ± 0.00049 | 0.96401 ± 0.00454 |