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Table 1 Characteristics of the reads from 12 duck skin transcriptomes

From: Dynamic transcriptome profiling towards understanding the morphogenesis and development of diverse feather in domestic duck

Sample Raw bases (Gb) Q20 value (%) GC content (%) Raw reads Clean reads Total mapped reads Unique mapped readsa
EP1 4.23 97.41 52 47,016,964 45,760,796 33,808,649 (73.88%) 32,354,205 (70.70%)
EP2 4.25 97.47 53 47,310,314 46,088,812 33,990,213 (73.75%) 32,496,607 (70.51%)
EF1 4.00 96.92 48 44,475,234 42,914,954 33,946,076 (79.10%) 32,667,856 (76.12%)
EF2 4.31 96.78 51 47,959,362 45,914,254 35,291,893 (76.86%) 33,725,136 (73.45%)
MP1 4.30 97.59 55 47,812,176 46,738,350 33,041,341 (70.69%) 29,841,803 (63.85%)
MP2 4.36 97.58 54 48,498,554 47,459,658 32,965,478 (69.46%) 28,966,738 (61.03%)
MF1 4.36 97.49 52 48,448,010 47,364,954 35,355,911 (74.65%) 32,808,228 (69.27%)
MF2 4.28 97.68 51 47,560,598 45,252,442 34,196,920 (75.57%) 31,667,123 (69.98%)
LP1 4.35 97.13 49 48,414,006 46,679,934 37,128,381 (79.54%) 35,833,060 (76.76%)
LP2 4.35 97.21 48 48,369,596 46,514,142 37,313,860 (80.22%) 35,996,537 (77.39%)
LF1 4.34 97.16 48 48,217,072 46,385,418 37,094,213 (79.97%) 35,737,770 (77.05%)
LF2 4.35 97.07 48 48,378,418 46,602,248 37,258,174 (79.95%) 35,878,071 (76.99%)
  1. aUnique mapped reads, reads that matched the reference genome in only one position