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Table 4 The ratio of distorted SNPs within or outside GC regions detected in the current study for the SNP datasets of two different segregation types generated in the previous study (Tong, et al., 2016)

From: Identification of recombination events in outbred species with next-generation sequencing data

Segregation type Region SNP Distortedc Percent (%)
ab×aa Non-GC 17,640 5530 31.35
GCa 367 256 69.75
GC5b 99 84 84.84
aa×ab Non-GC 10,915 3831 35.10
GC 380 284 74.74
GC5 127 97 76.38
  1. aGC, the region within GCs identified in at least one individual
  2. bGC5, the region covered by GCs identified in at least 5 different individuals
  3. cThe seriously distorted SNP has a p-value of less than 0.01 with the Chi-squared test