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Table 2 Summary of gene ontology analysis

From: De novo transcriptome assembly of Pueraria montana var. lobata and Neustanthus phaseoloides for the development of eSSR and SNP markers: narrowing the US origin(s) of the invasive kudzu

Accessions

Transcripts

Orfs

Predictions

BLAST Hits

Annotated GO IDs

ECs

CPP27

79,194

37,741

30,716

28,795

18,446

8039

(18,325/60869)

(13,534/17182)

(12,583/16212)

(7958/10488)

Pmnk6

61,042

50,320

42,386

39,366

24,447

6337

(15,736/45306)

(14,821/27565)

(12,705/26661)

(8079/16368)

CPP02

92,406

34,223

27,661

22,472

13,230

4064

(18,412/73994)

(14,677/12984)

(10,407/12065)

(6085/7145)

  1. Orfs open reading frames, GO gene ontology, ECs enzyme codes. Parentheses: (contigs/singletons)
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BMC Genomics

ISSN: 1471-2164

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