Skip to main content

Table 1 Summary statistics of 3’ UTR length of canonical transcripts in the nine teleost genomes

From: Evolutionary divergence of 3’ UTRs in cichlid fishes

Species Cichlids Non-cichlids
M. zebra P. nyererei H. burtoni N.brichardi O. niloticus O. latipes P. formosa A. mexicanus D. rerio
Genome size (Mb) 860 830 831 848 928 870 749 1191 1372
Number of transcripts 23,910 22,358 23,089 21,921 25,191 21,979 24,901 22,920 25,866
Total 3’UTR length (Mb) 34.18 27.73 35.85 23.99 35.80 21.40 30.79 19.16 29.96
Percentage of 3’ UTR in genome 3.97 3.34 4.31 2.83 3.86 2.46 4.11 1.61 2.18
Mean length 1429 1240 1553 1094 1421 974 1237 836 1158
Median length 993 842 1087 690 970 669 812 516 691
25th percentile 410 317.25 463 194 381 277 333 175 270
75th percentile 1980 1727 2143 1552 1990.5 1334 1680 1133 1540
Maximum length 15,626 12,530 21,087 16,134 17,796 15,264 16,660 12,260 22,013