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Table 1 Summary of genome assembly and gene prediction

From: The genome of Rhizophagus clarus HR1 reveals a common genetic basis for auxotrophy among arbuscular mycorrhizal fungi

Assembled genome

Predicted genes

Assembly size

116.4 Mbp

Number of genes

27,753

Number of scaffolds

4424

Average of gene length

1465 bp

N50

59.94 kbp

Average of CDS length

1139 bp

GC %

27.2%

Average of protein length

379 aa

BUSCO genome benchmarks (fungi odb9)

BUSCO genome benchmarks (fungi odb9)

Complete single copy

87.9% (257/290)

Complete single copy

94.8% (275/290)

Complete duplicated

0.7% (2/290)

Complete duplicated

2.1% (6/290)

Fragmented

3.4% (10/290)

Fragmented

0.7% (2/290)

Missing

8.0% (23/290)

Missing

2.4% (7/290)