Fig. 8

Distribution of SNPs inside and outside contigs of QPX related to virulence and adaptation. Location of SNPs to the protein domains was inferred after alignment of the contigs to the reference genome. The x-axis shows the position of SNPs on the reference genome. The y-axis shows the genomic position from aligning the contigs with predicted protein domains to the reference genome. The size of the dots represent the sequence size of the reference genome. VA: Virginia strain in red, NY-a,b: New York strains a and b in green and blue respectively, and MA: Massachusetts strain in purple