Genome-wide epigenetic variation among ash trees differing in susceptibility to a fungal disease

BMC Genomics

Table 2 Twenty genes with highest density of N-DMPs

Gene ID	N-DMP Density	Functional Annotation
376950	0.2321	None
016370	0.2119	Pg1 protein, lyase activity
376920	0.1712	NADH dehydrogenase subunit 2
016400	0.1689	NADH dehydrogenase subunit 2
376910	0.1668	NADH dehydrogenase subunit 2
009390	0.1602	ATP-ase, AAA-type
016410	0.1558	NADH dehydrogenase subunit 2
238880	0.1545	Ribosomal protein L5
285710	0.1488	Ribosomal protein L2
078310	0.1468	Photosystem II CP43 Chlorophyll partial
196460	0.1455	Ribosomal protein S12
016420	0.1454	ATP-ase, AAA-type
016390	0.1432	Ribosomal protein S7
277070	0.1429	NADH dehydrogenase subunit 2
376900	0.1424	ATP-ase, AAA-type
363290	0.1418	Ribosomal protein L23
197880	0.1409	NADH dehydrogenase subunit 4
137570	0.1405	Photosystem I p700 apoprotein a1
190110	0.1403	NADH dehydrogenase subunit 2
221320	0.1396	Photosystem I p700 apoprotein a2

All N-DMPs were completely unmethylated in all F. excelsior samples. Density calculated as: #N-DMPs/(gene length*2) (where multiplication by two takes into account both strands of DNA)

ISSN: 1471-2164