Genome sequence and effectorome of Moniliophthora perniciosa and Moniliophthora roreri subpopulations

BMC Genomics

Table 1 Genetic features of genomes

	MrPeru	Mp4145	Mp1441	Mp4124	Mp178	Mp4071
Assembled genome size (Mb)	45.17	47.01	46.34	45.47	43.92	44.42
N50 scaffold size (Kb)	56	87	90	90	92	92
NumN50	226	141	137	133	126	128
Longest scaffold size (Kb)	530	910	910	910	910	910
Number of contigs	2994	2676	2100	1967	1526	1689
GC %	47.8	47.7	47.7	47.8	48	47.9
Proteome predicted	14,154	14,210	13,404	12,188	11,203	11,474

Comparison of the assembly statistics of Illumina sequencing of the genome of Moniliophthora spp. MrPeru - Moniliophthora roreri isolate from Peruvian subpopulation. Mp4145 and Mp1441 - M. perniciosa isolates from cacao subpopulations in Bahia. Mp4124 - M. perniciosa isolate from cacao subpopulation in Ecuador. Mp178 - M. perniciosa isolate from wild solanaceous subpopulation (Lobeira) in Minas Gerais. Mp4071 - M. perniciosa isolate from wild solanaceous subpopulation (Caiçara) in Bahia

ISSN: 1471-2164