Genome data uncover four synergistic key regulators for extremely small body size in horses

BMC Genomics

Table 6 Linkage disequilibrium for height-associated variants

	ADAMTS17 (ECA1) g.105258161C > A	OSTN (ECA19) g.28594461G > A	GH1 (ECA11) g.15520392C > T	DIAPH3 (ECA17) g.35425648_35418404del	HMGA2 (ECA6) HMGA2:c.83G > A
g.105258161C > A		0.0711316	0.00250835	0.0495211	0.394906
g.28594461G > A	0.0711316		0.0665219	0.0384475	0.0104857
g.15520392C > T	0.00250835	0.0665219		0.00746066	0.0127573
g.35425648_35418404del	0.0495211	0.0384475	0.00746066		0.0213281
HMGA2:c.83G > A	0.394906	0.0104857	0.0127573	0.0213281

Inter-variant allele count correlations (r²) are shown for all five variants genotyped in Shetland ponies and Shetland pony related breeds

ISSN: 1471-2164