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Table 1 Detail information of all isolates, Clustering of Cronobacter sequence type by MLST and O-serotypes according to gnd and galF sequence analysis

From: DNA sequence-based re-assessment of archived Cronobacter sakazakii strains isolated from dairy products imported into China between 2005 and 2006

Isolate PubMLST ID number API20E bionumber Organism ST O-serotypea galF loci gnd loci Source Country Year
CS-6 1956 06257300153722011 C. sakazakii 13 O:2 25 28 Powdered infant formula New Zealand 2005
CS-8 1957 06257300153722011 C. sakazakii 13 O:2 25 28 Powdered infant formula New Zealand 2005
CS-25 1967 06257300153722011 C. sakazakii 13 O:2 25 28 Powdered infant formula New Zealand 2005
CS-30 1968 06257300153722011 C. sakazakii 13 O:2 25 28 Powdered infant formula New Zealand 2005
CS-36 1972 06257300153722011 C. sakazakii 13 O:2 25 28 Powdered infant formula New Zealand 2006
CS-45 1978 06257300153722011 C. sakazakii 13 O:2 25 28 Powdered infant formula New Zealand 2006
CS-48 1980 06257300153722011 C. sakazakii 13 O:2 25 28 Powdered infant formula New Zealand 2006
CS-52 1983 06257300153722011 C. sakazakii 13 O:2 25 28 Powdered infant formula New Zealand 2006
CS-72 2000 06257300153722011 C. sakazakii 13 O:2 25 28 Powdered infant formula New Zealand 2006
CS-2 1953 06257300153722011 C. sakazakii 13 O:2 25 28 Powdered infant formula Netherlands 2005
CS-1 1952 06257300153722011 C. sakazakii 13 O:2 25 28 Dairy product ingredient USA 2005
CS-62 1992 06257300153722011 C. sakazakii 13 O:2 25 28 Dairy product ingredient USA 2006
CS-65 1995 06257300153722011 C. sakazakii 13 O:2 25 28 Dairy product ingredient USA 2006
CS-66 1996 06257300153722011 C. sakazakii 13 O:2 25 28 Dairy product ingredient USA 2006
CS-9 1958 06257300153722011 C. sakazakii 13 O:2 25 28 Dairy product ingredient New Zealand 2005
CS-17 1963 06257300153722011 C. sakazakii 13 O:2 25 28 Dairy product ingredient Australia 2005
CS-47 1979 06257300153722011 C. sakazakii 13 O:2 25 28 Dairy product ingredient France 2006
CS-64 1994 06257300153722011 C. sakazakii 13 O:2 25 28 Dairy product ingredient Belgium 2006
CS-18 1964 06257300153722011 C. sakazakii 13 O:2 25 28 Milk powder New Zealand 2005
CS-19 1965 06257300153722011 C. sakazakii 13 O:2 25 28 Milk powder New Zealand 2005
CS-61 1991 06257300153722011 C. sakazakii 13 O:2 25 28 Milk powder New Zealand 2006
CS-56 1987 06257300153722011 C. sakazakii 13 O:2 25 28 Milk powder New Zealand 2006
CS-60 1990 06257300153722011 C. sakazakii 13 O:2 25 28 Milk powder New Zealand 2006
CS-14 1961 06257300153722011 C. sakazakii 13 O:2 25 28 Milk powder USA 2005
CS-71 1999 06257300153722011 C. sakazakii 13 O:2 25 28 Milk powder France 2006
CS-34 1971 06257300153722011 C. sakazakii 13 O:2 25 28 Cheese Australia 2006
CS-37 1973 06257300153722011 C. sakazakii 13 O:2 25 28 Cheese Australia 2006
CS-38 1974 06257300153722011 C. sakazakii 13 O:2 25 28 Cheese Australia 2006
CS-33 1970 06257300153722011 C. sakazakii 13 O:2 25 28 Cheese France 2006
CS-44 1977 06257300153722011 C. sakazakii 13 O:2 25 28 Cheese France 2006
CS-32 1969 06257300153722011 C. sakazakii 13 O:2 25 28 Other dairy products New Zealand 2005
CS-63 1993 06257300153722011 C. sakazakii 13 O:2 25 28 Other dairy products USA 2006
CS-13 1960 06257300153722011 C. sakazakii 4 O:2 3 2 Dairy product ingredient USA 2005
CS-54 1985 06257300153722011 C. sakazakii 4 na 4 45/46 Dairy product ingredient USA 2006
CS-15 1962 06257300153722011 C. sakazakii 4 O:2 3 2 Other dairy products USA 2005
CS-58 1989 06257300153722011 C. sakazakii 4 na 4 45/46 Other dairy products New Zealand 2006
CS-70 1998 06257300153722011 C. sakazakii 4 O:2 3 2 Milk powder New Zealand 2006
CS-43 1976 06257300153722011 C. sakazakii 4 O:2 3 2 Cheese Italy 2006
CS-55 1986 06257300153722011 C. sakazakii 375 na 26 67 Dairy product ingredient New Zealand 2006
CS-53 1984 06257300153722011 C. sakazakii 375 na 26 67 Other dairy products New Zealand 2006
CS-5 1955 06257300153722011 C. sakazakii 375 na 26 67 Dairy product ingredient Poland 2005
CS-10 1959 06257300153722011 C. sakazakii 375 na 26 67 Other dairy products Poland 2005
CS-49 1981 06257300153722011 C. sakazakii 1 O:1 2 1 Whole milk powder New Zealand 2006
CS-24 1966 06257300153722011 C. sakazakii 1 O:1 2 1 Other dairy products New Zealand 2005
CS-67 1997 06257300153722011 C. sakazakii 21 O:1 19 21 Dairy product ingredient Canada 2006
CS-42 1975 06257300153722011 C. sakazakii 21 O:1 19 21 Other dairy products Canada 2006
CS-51 1982 06257300153722011 C. sakazakii 12 na 26 62 Other dairy products New Zealand 2006
CS-4 1954 06257300153722011 C. sakazakii 42 na / / Dairy product ingredient Poland 2005
CS-57 1988 06257300153722011 C. sakazakii 233 na 47 47 Other dairy products New Zealand 2006
CS-22 2449 2,405,610,540,464,611 E. coli na na na na Dairy product ingredient France 2005
CS-35 2451 0627634553532210 E. cloacae na na na na Powdered infant formula Netherlands 2006
CS-23 2450 0605710142500210 F. helveticus na na na na Powdered infant formula New Zealand 2005
  1. aThe O-serotype was predicted using the whole genome sequence by comparison with the defined C. sakazakii O-serotype regions in Cronobacter database [34]
  2. bna not applicable
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BMC Genomics

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